RNA Barcoding

Gammainfluenzavirus

Influenza C virus

Sequence Information

Serial numbers	Length	P value	Max total score	Max E value	BSW score	Regions
1	82	0.0013	152	8.00E-33	5.07	PB2
>Barcode_1 TTCTATTGACAATAGCAAAGGAATACAAAAGACTATGCCAAGATGCTAAGGCAGCTCAAATGATGACAGTAGGAACTGTATC Forward primer TTCTATTGACAATAGCAAA Reverse primer GATACAGTTCCTACT
2	68	0.004	126	4.00E-25	4.50	PB2
>Barcode_2 TCAAAAAGGGATCATGTTCTTGCAAGCGCCTCTTGTATAAATTATTGGAATTTTTGTGGACCTTGTGT Forward primer TCAAAAAGGGATCATGTTC Reverse primer ACACAAGGTCCACAAAAA
3	95	0.0004	176	6.00E-40	5.64	PB2
>Barcode_3 AACAATTCAGAAGTGATCAAAGAAGTTTATAAATCTAGATTTGGAAGATTAGAAAGAAGGAAAGAAATAATGTGGAAAGAACTTAGATTTACATT Forward primer AACAATTCAGAAGTGATCA Reverse primer AATGTAAATCTAAGTTCTT
4	89	0.0007	165	1.00E-36	5.37	PB2
>Barcode_4 CCAGAAAGAATGGAATTGATCCATGCATTAGGAGGAGAAACTTGGATACAAGAAGCTAACACTGCAGGGATTTCCAATGTTGATCAAAG Forward primer CCAGAAAGAATGGAATTGA Reverse primer CTTTGATCAACATTGGAAA
5	75	0.0022	139	6.00E-29	4.80	PB2
>Barcode_5 GCAAACTGGTTGAGTATATAAAAAGTACAAGTATGAGAATTGGAGAAACAGAAAGAAAGCTTGAAGAACTTATAC Forward primer GCAAACTGGTTGAGT Reverse primer GTATAAGTTCTTCAAGCTT
6	65	0.0051	121	2.00E-23	4.38	PB2
>Barcode_6 CCCATGCTACTCAAGAAAATTTCTGGTTCCGGAGTAAAAGTTAAAGATACAGTATATATCCAAGG Forward primer CCCATGCTACTCAAGAAAA Reverse primer CCTTGGATATATACTGT
7	78	0.0018	145	1.00E-30	4.91	PB2
>Barcode_7 TAGCTATGTGCATGATATTTTGCAGAGATGGAGATTATTTTAAAGACGCCCCTGCAACAATAACAATGGCAGATTTAA Forward primer TAGCTATGTGCATGATATT Reverse primer TTAAATCTGCCATTGTT
8	62	0.0065	115	7.00E-22	4.25	PB2
>Barcode_8 CTTGAGCTCTCTGATAATCTTGAAGCATTTGATTCATCAGGAAGAATTGTTGCAACAATTTT Forward primer CTTGAGCTCTCTGATAATC Reverse primer AAAATTGTTGCAAC
9	74	0.0024	137	2.00E-28	4.76	PB2
>Barcode_9 GCCATAACAAAAGGGTATGAAGCGCTAATCAAAAGGCTAGGAACAGGGGACAATGATATTCCTTCCTTAATTGC Forward primer GCCATAACAAAAGGGTATG Reverse primer GCAATTAAGGAAGGAAT
10	98	0.0003	182	1.00E-41	5.78	PB2
>Barcode_10 AGACCCAATAGAAAAGGAGTTTATTCCAGAGTTGCTAGAAAATTAGTGTCTACACAAGTTACTACTGGACATTATTCATTACATGAATTGATAAAGGT Forward primer AGACCCAATAGAAAAGGAG Reverse primer ACCTTTATCAATTCATGT
11	74	0.0024	137	2.00E-28	4.76	PB2
>Barcode_11 ATAAGGGTACCTTTAGTTGTTGGAGATGAACACATGGACACTTCGTTAGCACTATTAGAAGGGTTTAGTGTTTG Forward primer ATAAGGGTAC Reverse primer CAAACACTAAACCCTTCT
12	68	0.004	126	4.00E-25	4.50	PB1
>Barcode_12 GTCACATCGCTGATATCAACAACATACCCCTATACAGGGCCACCTCCAATGTCACATGGATCATCAAC Forward primer GTCACATCGCTGATATCAA Reverse primer GTTGATGATCCATGTGACA
13	66	0.0047	122	5.00E-24	4.41	PB1
>Barcode_13 AAATACACTTTGGAAACTATTAAAAGAACATATGACTACTCAAGAACATCAGTTGAAAAAACATCG Forward primer AAATACACTTTGGAAACT Reverse primer CGATGTTTTT
14	104	0.0002	193	7.00E-45	5.98	PB1
>Barcode_14 ATAAAAACTAAAGTACCTGTAATGGGAATTGACTCAATTAAACATGATGAGTTTTTAATTAGAGCATTAACTATTAATACCATGGCCAAAGATGGGGAAAGAGG Forward primer ATAAAAACTAAAGTACCTG Reverse primer CCTCTTTCCCCATCTTTGG
15	62	0.0065	115	7.00E-22	4.25	PB1
>Barcode_15 AGGATGAACAGTGATCAGTTTGCAGTTAATATAACTGGAGACAATAGTAAATGGAATGAATG Forward primer AGGATGAACAGTGATCAGT Reverse primer CATTCATTCCATTTACT
16	62	0.0065	115	7.00E-22	4.25	PB1
>Barcode_16 AACTTTGACAAAACTATTGATATATTTAGAGCACATGGCCCAATAAGGGTTGAAGAAAATGA Forward primer AACTTTGACAAAACTATTG Reverse primer TCATTTTCTTCAACCCTT
17	80	0.0015	148	1.00E-31	4.99	PB1
>Barcode_17 AGAGCAAACAGAACCCTATTGAATACAGATATGAGAGCAATGATGGCAGAAGAGAAAAGATATCAAATGGTTTGCGACAT Forward primer AGAGCAAACAGAACCCT Reverse primer ATGTCGCAAACCATTTGA
18	62	0.0065	115	7.00E-22	4.25	PB1
>Barcode_18 AAAAGCGTGTTTGAATCAGCGGACATAAATCCTCCAATTGGGGCTATGAGCATTGGAGAGGC Forward primer AAAAGCGTGTTTGAATCAG Reverse primer GCCTCTCCAATGCTCA
19	121	0.0001	176	9.00E-40	6.25	PB1
>Barcode_19 TTGAAAGTAGATGAGGAGGGGCTGTTAAACCCTTTCCTCCTACTTGCACATATTTTTGTTATTCCATTAAATGAAAAAATCCTCTTGCTACTGCTAGCAGAAGCAGGGGATCCGAAATGTC Forward primer TTGAAAGTAGATGAGGAGG Reverse primer GACATTTCGGATCCCCTGC
20	71	0.0031	132	9.00E-27	4.63	P3
>Barcode_20 ATTGGAATAACAAGAAAAGCAGATGATAGCTATTTTCAATCCAAGTTTGGTAAACTTGGAAATAGCTGCAA Forward primer ATTGGAATAACAAGAAAAG Reverse primer TTGCAGCTATTTCCAAGTT
21	60	0.0076	111	8.00E-21	4.16	P3
>Barcode_21 GCAACTGCTGCTGATTTTCTTAGGAAAGAAAACATGTTTAACGAAATCTTCTTACCAGAC Forward primer GCAACTGCTGC Reverse primer GTCTGGTAAGAAGATTTCG
22	86	0.0009	159	5.00E-35	5.25	P3
>Barcode_22 GATAATGAATTGGAAGATTACGCTGAACATCTAAATAAAACCATGGAAGGGGTCTTGCAAGGAACAAATTGCGCAAGAGAAATGGG Forward primer GATAATGAATTGGAAGATT Reverse primer CCCATTTCTCTTGCGCA
23	113	0.0001	209	8.00E-50	6.32	P3
>Barcode_23 AAATGCATTCTTACTGTTGGGGCACTAATGACTGAATGTAGACTATTTCCTGGGAAAATAAAAGTGGTGCCCATATATGCTAGAAGTAAAGAAAGGAAATCAATGCAAGAAGG Forward primer AAATGCATTCTTACTGTTG Reverse primer CCTTCTTGCATTGATTTCC
24	77	0.0019	143	5.00E-30	4.88	P3
>Barcode_24 ACAACAGTTAGAATGAAGAAAGGAGAGTCAGTTATTGGAAGAGAAGTCCCTCTTTATTTATACTGTAGGACAACTGC Forward primer ACAACAGTTAGAATGAAGA Reverse primer GCAGTTGTCCTACAGT
25	137	0.0001	254	5.00E-63	6.40	P3
>Barcode_25 CTAATGGCTCTTGAAGGTGACAAGAAAAATAAATCATCTTTTGGATTTAATCCAGAAGGATTATTAGAAAAGATTGAAGAGTGTCTTATAAATAATCCGATGTGCCTTTTTATGGCTCAAAGGTTGAATGAACTTGT Forward primer CTAATGGCTCTTGAAGGTG Reverse primer ACAAGTTCATTCAACCTTT
26	62	0.0065	115	7.00E-22	4.25	HE
>Barcode_26 CTTGTTAAGCCCAAAGCTGGAGCCTCTGTCTTGAATCAAAGTACATGGATTGGCTTTGGAGA Forward primer CTTGTTAAGCCCAAAGC Reverse primer TCTCCAAAGCCAATCCATG
27	77	0.0019	143	5.00E-30	4.88	HE
>Barcode_27 TATGATAGTAAAGAAGTGTACAATAAAAGAGGATGTGACAACTACTTTCAAGTGATCTATGATTCATCTGGAAAAGT Forward primer TATGATAGTAAAGAAGTGT Reverse primer ACTTTTCCAGATGAATCAT
28	75	0.0022	139	6.00E-29	4.80	HE
>Barcode_28 GTTGGAGGACTAGATAACAGGGTATCACCTTACACAGGGAATTCTGGAGACACCCCAACAATGCAATGTGACATG Forward primer GTTGGAGGACTAGATAACA Reverse primer CATGTCACATTGCATTGTT
29	88	0.0008	163	4.00E-36	5.31	NP
>Barcode_29 TTTCAAAAATGTCTGACAGACGTCAAAACAGAAAGACGCCAGATGAGCAACGCAAAGCCAATGCTCTCATAATAAATGAGAACATTGA Forward primer TTTCAAAAATGTCTGACAG Reverse primer TCAATGTTCTCATTTATT
30	113	0.0001	209	8.00E-50	6.32	NP
>Barcode_30 GCCTACATTGCCATTTGTAAGGAAGTGGGCCTTAATGGCGATGAAATGTTGATCCTGGAAAATGGCATAGCAATTGAAAAAGCTATAAGAATATGTTGTGATGGAAAGTATCA Forward primer GCCTACATTGCCATTTGT Reverse primer TGATACTTTCCATCACAAC
31	101	0.0003	187	3.00E-43	5.79	NP
>Barcode_31 ACAAGCCGCTCAAGAATTGTTCAAATTCTCAAATCTCATTGGGGAAATGAACTAAACAGAGCAAAAATTGCAGGAAAAAGACTCGGCTTCTCTGCACTCTT Forward primer ACAAGCCGCTCAAGAA Reverse primer AAGAGTGCAGAGAAGCCGA
32	74	0.0024	137	2.00E-28	4.76	NP
>Barcode_32 TTAAGAGCACTAGCAAGAAGAGTTGTAAAAGCAAACTACAATGATGCCAGAGAAGCTCTAAATGTCATCGCAGA Forward primer TTAAGAGCACTAGCAAGAA Reverse primer TCTGCGATGACATTTAGAG
33	74	0.0024	137	2.00E-28	4.76	NP
>Barcode_33 GTCTTCAATATTGCAATGGAGAAAATTGGAATTTGTTCCTTTCAAGGGACAATAATGAACGATGATGAAATTGA Forward primer GTCTTCAATATTGCAATGG Reverse primer TCAATTTCATCATCGTTCA
34	146	0.0001	270	5.00E-68	6.43	NP
>Barcode_34 TCAATAGAGGACAAGGCTCAAGTATTAATGATGGCATGCTTTGGACTTGCTTATGAAGACTTCAGTTTGGTCTCTGCTATGGTTAGCCACCCTCTTAAGTTGAGAAACAGAATGAAAATAGGAAACTTCAGAGTCGGTGAAAAAGT Forward primer TCAATAGAGGACAAGGCTC Reverse primer ACTTTTTCACCGACTCTGA
35	77	0.0019	143	5.00E-30	4.88	NP
>Barcode_35 GGGTCTTCAATGTATGATTTAAATGATCAAGAAAAACAAAATCCAATAAATTTCAGGTCTGGAGCACACCCTTTCTT Forward primer GGGTCTTCAATGTATGATT Reverse primer AAGAAAGGGTGTGCTCCAG
36	72	0.0029	108	1.00E-19	4.57	NP
>Barcode_36 ATTTTATGATCAACTGTTGTATTGCTATATATAATTCAAAAATCTCCTTGCTACTGCTAGCAGAAGCAGGGG Forward primer ATTTTATGATCAACTGTTG Reverse primer CCCCTGCTTCTGCTAGC
37	132	0.0001	244	3.00E-60	6.39	NS
>Barcode_37 CAAAATGTCCGACAAAACAGTCAAATCAACAAATTTAATGGCATTTGTAGCCACAAAAATGTTAGAGAGACAAGAAGATTTAGACACATGCACTGAAATGCAAGTAGAAAAAATGAAAACGTCAACAAAAGC Forward primer CAAAATGTCCGACAAAACA Reverse primer GCTTTTGTTGACGTTTTCA
38	73	0.0026	135	7.00E-28	4.72	NS
>Barcode_38 TGTCACCATGTATTCCTAACTTTGATGGAAACGTCTGGGAAGCAACGATGTATCATCATCGTGGAGCAACTTT Forward primer TGTCACCATGTATTCCT Reverse primer AAAGTTGCTCCACGATGA
39	94	0.0005	174	2.00E-39	5.54	NS
>Barcode_39 GTGGCCGGAATTGAAACAGGAATTAGAAAATGTTTCAGATGCATTAAAAGCGGATTCGTTATGGCTACCGATGAAATCTCTCTCACTATACTCC Forward primer GTGGCCGGAATTGAAACAG Reverse primer GGAGTATAGTGAGAGAGAT
40	85	0.001	158	2.00E-34	5.20	NS
>Barcode_40 AAGTATCAAATCAGGAGCCCAGCTCGATCCCTATTGGGGAAATGAAACACCAGATATTGACAAGACTGAAGCTTATATGCTCTCG Forward primer AAGTATCAAATCAGGAGCC Reverse primer CGAGAGCATATAAGCTTCA